Overview | Loading example data | The main function of 'phenesse': weib_percentile | weib_percentile calculates a Weibull-parameterized estimate of phenology for any percentile of a distribution | Use non-parametric bootstrapping to calculate confidence interval of estimate | CAUTION: Calculating confidence interval of Weibull-corrected estimates are computationally expensive. Consider options to parallelize calculations | Options to parallelize weib_percentile_ci | CIs for mean and quantile estimates | Another functionality of phenesse, is it provides functions to calculate confidence intervals of quantile and mean estimates using non-parametric bootstrapping
Package: phenesse 0.1.3
phenesse: Estimate Phenological Metrics using Presence-Only Data
Generates Weibull-parameterized estimates of phenology for any percentile of a distribution using the framework established in Cooke (1979) <doi:10.1093/biomet/66.2.367>. Extensive testing against other estimators suggest the weib_percentile() function is especially useful in generating more accurate and less biased estimates of onset and offset (Belitz et al. 2020) <doi:10.1111/2041-210X.13448>. Non-parametric bootstrapping can be used to generate confidence intervals around those estimates, although this is computationally expensive. Additionally, this package offers an easy way to perform non-parametric bootstrapping to generate confidence intervals for quantile estimates, mean estimates, or any statistical function of interest.
Authors:
phenesse_0.1.3.tar.gz
phenesse_0.1.3.zip(r-4.7-any)phenesse_0.1.3.zip(r-4.6-any)phenesse_0.1.3.zip(r-4.5-any)
phenesse_0.1.3.tgz(r-4.6-any)phenesse_0.1.3.tgz(r-4.5-any)
phenesse_0.1.3.tar.gz(r-4.7-any)phenesse_0.1.3.tar.gz(r-4.6-any)
phenesse_0.1.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
phenesse/json (API)
| # Install 'phenesse' in R: |
| install.packages('phenesse', repos = c('https://mbelitz.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/mbelitz/phenesse/issues
Datasets:
- inat_examples - Example iNaturalist-sourced data
Last updated from:ad8c67d0a4. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 113 | ||
| source / vignettes | OK | 214 | ||
| linux-release | OK | 120 | ||
| macos-release | OK | 156 | ||
| macos-oldrel | OK | 236 | ||
| windows-devel | OK | 84 | ||
| windows-release | OK | 65 | ||
| windows-oldrel | OK | 85 | ||
| wasm-release | OK | 80 |
Exports:estimate_cimean_ciquantile_ciweib_percentileweib_percentile_ci
